[NeXML]
Rich phyloinformatic dataThe future data exchange standard is here!
NeXML is an exchange standard for representing phyloinformatic data — inspired by the commonly used NEXUS format, but more robust and easier to process.
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nexml subversion repository
Code for the nexml project includes xml schema, parsing and serialization code in various programming languages (now java, perl, python and C++). We store this code on a subversion repository hosted by SourceForge. For instructions on how to check out our code visit the svn instructions page. To get commit access, you'll need a SourceForge account and ask us to be added to the project. Below is a list of the ten most recent commits:
- Added getHref() method (<em>Wed, 25 Jan 2012 22:32:34 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/javascript/jsonlib/nexml.js">/trunk/nexml/javascript/jsonlib/nexml.js</a></td></tr> </table> by rvos on Wed, 25 Jan 2012 22:32:34 +0000 [link]
- Oops, need to check for definedness in a different way in JavaScript (<em>Wed, 25 Jan 2012 16:21:10 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/javascript/jsonlib/nexml.js">/trunk/nexml/javascript/jsonlib/nexml.js</a></td></tr> </table> by rvos on Wed, 25 Jan 2012 16:21:10 +0000 [link]
- Added optional parameter for dealing with different XML2JSON mappings (<em>Wed, 25 Jan 2012 16:03:37 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/javascript/jsonlib/nexml.js">/trunk/nexml/javascript/jsonlib/nexml.js</a></td></tr> </table> by rvos on Wed, 25 Jan 2012 16:03:37 +0000 [link]
- Corrected version number in schema documentation (<em>Thu, 19 Jan 2012 15:27:11 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/overview.html">/trunk/nexml/html/include/overview.html</a></td></tr> </table> by rvos on Thu, 19 Jan 2012 15:27:11 +0000 [link]
- Changed link to updated slide show. (<em>Thu, 19 Jan 2012 15:26:02 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/footer.tmpl">/trunk/nexml/html/include/footer.tmpl</a></td></tr> </table> by rvos on Thu, 19 Jan 2012 15:26:02 +0000 [link]
- Adding Names On Nodes logo. (<em>Fri, 13 Jan 2012 00:00:00 GMT</em>)<br/><br/> <table> <tr><td><strong>Added</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/namesonnodes.png">/trunk/nexml/html/include/namesonnodes.png</a></td></tr> </table> by rvos on Fri, 13 Jan 2012 00:00:00 +0000 [link]
- Added Names On Nodes to home page. (<em>Fri, 13 Jan 2012 00:00:00 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/static/index.tmpl">/trunk/nexml/html/include/static/index.tmpl</a></td></tr> </table> by rvos on Fri, 13 Jan 2012 00:00:00 +0000 [link]
- Small HTML formatting change (<em>Sun, 25 Dec 2011 19:50:58 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/static/index.tmpl">/trunk/nexml/html/include/static/index.tmpl</a></td></tr> </table> by rvos on Sun, 25 Dec 2011 19:50:58 +0000 [link]
- Adding reference to phyloGeoRef (with icon) on the home page. (<em>Sun, 25 Dec 2011 19:49:32 GMT</em>)<br/><br/> <table> <tr><td><strong>Modified</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/static/index.tmpl">/trunk/nexml/html/include/static/index.tmpl</a></td></tr> <tr><td><strong>Added</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/html/include/phylogeoref.jpg">/trunk/nexml/html/include/phylogeoref.jpg</a></td></tr> </table> by rvos on Sun, 25 Dec 2011 19:49:32 +0000 [link]
- Bio::Phylo has moved to github (<em>Sun, 25 Dec 2011 18:56:40 GMT</em>)<br/><br/> <table> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/COPYING">/trunk/nexml/perl/COPYING</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/build.sh">/trunk/nexml/perl/build.sh</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/inheritance">/trunk/nexml/perl/inheritance</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/MANIFEST.skip">/trunk/nexml/perl/MANIFEST.skip</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/README.txt">/trunk/nexml/perl/README.txt</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/experimental">/trunk/nexml/perl/experimental</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/LICENSE">/trunk/nexml/perl/LICENSE</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/inheritance.sh">/trunk/nexml/perl/inheritance.sh</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/TODO.txt">/trunk/nexml/perl/TODO.txt</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/t">/trunk/nexml/perl/t</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/BioPhylo.kpf">/trunk/nexml/perl/BioPhylo.kpf</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/script">/trunk/nexml/perl/script</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/podinherit">/trunk/nexml/perl/podinherit</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/lib">/trunk/nexml/perl/lib</a></td></tr> <tr><td><strong>Deleted</strong></td> <td> <a rel="nofollow" target="_blank" href="https://www.codingmonkeys.de/project/svn/trunk/nexml/perl/Makefile.PL">/trunk/nexml/perl/Makefile.PL</a></td></tr> </table> by rvos on Sun, 25 Dec 2011 18:56:40 +0000 [link]