nexml - index of /nexml/examples/

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The future data exchange standard is here!

nexml is an exchange standard for representing phylogenetic data — inspired by the commonly used NEXUS format, but more robust and easier to process.

Process nexml data

Directory listing

~ / nexml / examples
digg reddit del.icio.us facebook | Mon Dec 1 17:35:19 2008 —

This subdirectory contains nexml documents. These example files are non-normative, they are just meant to illustrate some of the facilities of the nexml specification. At present, they reference the schema by a relative path: ../xsd/nexml.xsd. To validate them, you therefore need to have the schema itself too. The way we have it set up is to check out the full nexml head revision from the subversion repository, and then open the files in a schema aware xml editor. We use the oXygen xml plugin for eclipse to edit xml, but there are of course many others. 

      Name                 Last modified       Size  Description


[DIR] Parent Directory     19-Sep-2008 16:54      -  Folder
[TXT] TreeInfer.xml        07-Feb-2008 00:28     6k  XML instance document
[TXT] characters.xml       27-Mar-2008 15:10    13k  XML instance document
[TXT] compact.xml          07-Feb-2008 00:28     3k  XML instance document
[TXT] mesquite.xml         07-Feb-2008 00:28     1k  XML instance document
[   ] mesquite.xsd         07-Feb-2008 00:28     2k  XML schema file
[TXT] nexml.xml            07-Feb-2008 00:28     1k  XML instance document
[TXT] phenote.xml          21-May-2008 12:20     1k  XML instance document
[   ] phenote.xsd          21-May-2008 12:20     2k  XML schema file
[TXT] rest.xml             07-Feb-2008 00:28     4k  XML instance document
[TXT] taxa.xml             07-Feb-2008 00:28     4k  XML instance document
[TXT] trees.xml            19-May-2008 12:00     4k  XML instance document
[TXT] verbose.xml          07-Feb-2008 00:28     4k  XML instance document